PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02301.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 212aa MW: 22778.4 Da PI: 9.6001

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	92.4	5.3e-29	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C++lr++C++dCv++p++ p++q++++ +++k++G++ +++l++a+p++ r+ +++sl+yeA+ r+ +P yG++g+++++++ +q+++++ RDY02301.1 4 SCNGCRILRKGCSEDCVIRPCLewincPKAQANATLFLAKFYGRAGLVNLINAAPQHLRPGVLKSLMYEACGRIANPTYGSLGLFWTGEWAQCQAAVDA 102 6************************************************************************************************99 PP DUF260 95 allkee 100 +l +++ RDY02301.1 103 VLSGAQ 108 988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MKMSCNGCRI LRKGCSEDCV IRPCLEWINC PKAQANATLF LAKFYGRAGL VNLINAAPQH 60 LRPGVLKSLM YEACGRIANP TYGSLGLFWT GEWAQCQAAV DAVLSGAQIN VVESSHSQVI 120 GARGNKHVPS VLGISHVSKV KGKGKLKRTE NVIMPKPRVG SVNSVALWKP TSSHDLRGSK 180 GDNEEIMEAL LVSQDKPSQN GGAKLDLELT LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	1e-61	LBD family protein