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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY02764.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | MYB | ||||||||
| Protein Properties | Length: 237aa MW: 27112.6 Da PI: 7.6978 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 54.4 | 2.8e-17 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W++ Ed+ll +v+q+G g W++++++ g++R++k+c++rw++yl
RDY02764.1 9 KGAWSEVEDDLLRACVRQYGEGKWHLVPSRAGLNRCRKSCRLRWLNYL 56
79********************************************97 PP
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| 2 | Myb_DNA-binding | 52.7 | 1e-16 | 62 | 106 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg +T++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++y
RDY02764.1 62 RGDFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTPNDVKNYWNTY 106
899*******************.*********.************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 237 aa Download sequence |
MEGSLCVRKG AWSEVEDDLL RACVRQYGEG KWHLVPSRAG LNRCRKSCRL RWLNYLKPNI 60 KRGDFTEDEV DLIIRLHKLL GNRWSLIAGR LPGRTPNDVK NYWNTYIRRK ASSHKKVVMN 120 EKEEERVKPH VVIKPLARTI SRSSPLLLSS VVGEGDSGAK HCSTQSCATS SECNNWCWET 180 FMDDNGGNLD NNLDGVGTLV EDIDCSHDLT SLTQQDRDFF IESQNWSDFL NINLWNS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G66370.1 | 6e-55 | MYB family protein | ||||




