PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02914.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 270aa MW: 31060.4 Da PI: 5.616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed +lv +v+ +G ++W+ Ia++ g++Rt+k+c++rw +yl RDY02914.1 8 RGPWTEQEDYKLVYCVNIFGDRRWDFIAKESGLNRTGKSCRLRWVNYL 55 89********************************************97 PP
2	Myb_DNA-binding	50.8	3.7e-16	61	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E+ l +++ +lG++ W++Iar+++ gRt++++k++w++++ RDY02914.1 61 RGKLTLQEEHLVMELHSKLGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MVQQEIRRGP WTEQEDYKLV YCVNIFGDRR WDFIAKESGL NRTGKSCRLR WVNYLHPDLK 60 RGKLTLQEEH LVMELHSKLG NRWSRIARKL PGRTDNEIKN YWRTHMRKKK AQEKKRASSS 120 TVSSSCCQSS VSSNNNHVVD SHNGSKEGGE ESFYDTGGHD GDMMGLVNVG EDQVGEKGYS 180 YSMDDIWKEI VVSEEENVYN LQPVYDGHSE EGCNFSCPPP SIMPSPSWDE YNSSHLLWVM 240 DEEESNKVLF PTLSDQYFSC YEQGSAFLTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	4e-73	MYB family protein