PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04187.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 386aa MW: 43634.8 Da PI: 4.972

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00083	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sFs+ L H+r+H RDY04187.1 4 HKCKLCFRSFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	13.8	0.00017	251	273	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H RDY04187.1 251 YKCETCDKVFRSYQALGGHRASH 273 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEKHKCKLCF RSFSNGRALG GHMRSHMMNL PLSKPEEALS RTIQLSFEAE SASSSSSDDD 60 DDDKGLSYGL RENPKRSIRL VDPEFSFAAA DTGSVILQDR ESESESSKNN PTRRRSKRPW 120 NNNNYYNNNN NNNNNNNNIN NNNNDNTNSH SNKRQVLGQK SKTESWVDHE PASSVSDATT 180 EEDVAFCLMM LSRDKWKRQK DQPQLVELED QYEEEEEEEE EEEEEEDEAF EESEESQETM 240 KLCKNRVRGR YKCETCDKVF RSYQALGGHR ASHKKIKVSI KVDGEHKSGT CGVEKKIHEC 300 PVCFRVFASG QALGGHKRTH VTGSAATATV PSSSAKFGNS FIDLNLPAPV DDDDASQIEN 360 SAVSDAEFII EAMTMAVRRL EVEWKL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEKHKCKLCF RSFSNGRALG GHMRSHMMNL PLSKPEEALS RTIQLSFEAE SASSSSSDDD  60
DDDKGLSYGL RENPKRSIRL VDPEFSFAAA DTGSVILQDR ESESESSKNN PTRRRSKRPW  120
NNNNYYNNNN NNNNNNNNIN NNNNDNTNSH SNKRQVLGQK SKTESWVDHE PASSVSDATT  180
EEDVAFCLMM LSRDKWKRQK DQPQLVELED QYEEEEEEEE EEEEEEDEAF EESEESQETM  240
KLCKNRVRGR YKCETCDKVF RSYQALGGHR ASHKKIKVSI KVDGEHKSGT CGVEKKIHEC  300
PVCFRVFASG QALGGHKRTH VTGSAATATV PSSSAKFGNS FIDLNLPAPV DDDDASQIEN  360
SAVSDAEFII EAMTMAVRRL EVEWKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-60	C2H2 family protein