PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04199.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 416aa MW: 46559.9 Da PI: 6.5449

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.9	4.5e-07	161	182	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H RDY04199.1 161 FCEICGKGFRRDANLRMHMRAH 182 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MSKSSSNPNA DPTRILHPED PYTTADPHVP LRNLFLVRTR MDSLQRFLSQ SIETKAPLTS 60 DQIAMVSDQT VSAIHQIIVN GAALVSHSQS STTAVAAAVS PDPPSYPKKP KPEPSANDKA 120 KKLVDSKVEL LEDDDAVEDF DDDSEIVELD AVEILAEHIH FCEICGKGFR RDANLRMHMR 180 AHGDQFKTPE ALAKPSETGA PRRPTQFSCP FAGCNRNRLH GRFRPLKSVV CVKNHFKRSH 240 CPKMYSCNRC HKKHFSVLSD LRSHAKHCGE SRWKCTCGTT FSRKDKLFGH IALFEGHAPA 300 LACDEEDKGK QVVEGHEIED PILMTESEFE LGKCFLDEEL PEGFFDDFGS IDNYCLREEK 360 MKAARPFMNV EMVPYCPQES FGNVVFAELN AISLGAIFVW KLGVRSVIIE CPHYAS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MSKSSSNPNA DPTRILHPED PYTTADPHVP LRNLFLVRTR MDSLQRFLSQ SIETKAPLTS  60
DQIAMVSDQT VSAIHQIIVN GAALVSHSQS STTAVAAAVS PDPPSYPKKP KPEPSANDKA  120
KKLVDSKVEL LEDDDAVEDF DDDSEIVELD AVEILAEHIH FCEICGKGFR RDANLRMHMR  180
AHGDQFKTPE ALAKPSETGA PRRPTQFSCP FAGCNRNRLH GRFRPLKSVV CVKNHFKRSH  240
CPKMYSCNRC HKKHFSVLSD LRSHAKHCGE SRWKCTCGTT FSRKDKLFGH IALFEGHAPA  300
LACDEEDKGK QVVEGHEIED PILMTESEFE LGKCFLDEEL PEGFFDDFGS IDNYCLREEK  360
MKAARPFMNV EMVPYCPQES FGNVVFAELN AISLGAIFVW KLGVRSVIIE CPHYAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	2e-74	C2H2 family protein