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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY04407.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 240aa MW: 26352.7 Da PI: 5.7613 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 57.1 | 4.6e-18 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
ykGVr++ +g+WvAeIr+p + r +r +lg+f t eAa a++ a++kl+g
RDY04407.1 39 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFETSHEAALAYDTAARKLYG 88
69****999.**********8...3.35*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 240 aa Download sequence |
MLKSGMGIEE RKQAKKSAQA SSRKGCMRGK GGPENASCTY KGVRQRTWGK WVAEIREPNR 60 GARLWLGTFE TSHEAALAYD TAARKLYGPD AKLNLPEFYM KSQSQPQSQC PPPPSATNAQ 120 IPQMENLHQP QIPLNIDMAT YSNFNSFNTN PSLTMASQQV GVAPIYTSDS IVSLPLDTNP 180 NLKPVGTYAK PMENEGEFHP SMGTMNEGLP VFDDSIWTEA AMSLDFPLIA AETEIYTADA |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75490.1 | 1e-51 | ERF family protein | ||||




