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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY04451.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 134aa MW: 15227.9 Da PI: 6.1194 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.4 | 5e-20 | 13 | 65 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
++y+GVr+++ +g+++AeIrdp + +r++lg+f taeeAa+a+++a+ +++g+
RDY04451.1 13 PRYRGVRRRP-WGKFAAEIRDPAR---HgTRVWLGTFLTAEEAARAYDRAAFEMRGA 65
68********.**********943...24**************************95 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 134 aa Download sequence |
MEEEKKKDTK EEPRYRGVRR RPWGKFAAEI RDPARHGTRV WLGTFLTAEE AARAYDRAAF 60 EMRGASAVLN FPNEYPSCSS MNSSSSLAPS SSSSSMARND HGKQVIEFEC LDDKLLEDLL 120 DCDDYAHHKD LPNK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G23230.1 | 2e-23 | ERF family protein | ||||




