PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY04474.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 322aa    MW: 36480.7 Da    PI: 7.3219
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY04474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.4e-18126178456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 + +++ eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  RDY04474.1 126 KKRLSLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 178
                 556899**********************************************9 PP
2HD-ZIP_I/II1278e-41124216193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekk+rls eqvk+LE+sFe  +kLeperK++la++Lglqprq+a+WFqnrRAR+ktk+lEk+ye+Lk++++a+k++n++L++++++L++el++
   RDY04474.1 124 EKKKRLSLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKHLEKEYEVLKKQFEAVKADNDSLKAQNQKLHAELQT 216
                  69***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAFPPPHTFM FQTHEDHDHH QLHLRSTSTS LNAFPSFPPH HFQGNNLSLS LTHTYTTHSS  60
SLSISAIPSQ FIYFVHVYQS GGGGGGAGAG FMMKRSMSFS GIENKCDEVH GDDELSDDGS  120
QLGEKKKRLS LEQVKALEKS FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK  180
HLEKEYEVLK KQFEAVKADN DSLKAQNQKL HAELQTLKTS RECCETGTVN LKKETEGSWS  240
NGSNNSSEIN LDLSRTPVMN SPVSSQNGKN LLPTSHKPSS ITQLLQCSSR SDLQDESFCN  300
MFHNIDEQQN FWPWPDQQHQ FH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01220.12e-68HD-ZIP family protein