PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY05124.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 170aa    MW: 19981.4 Da    PI: 9.7007
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY05124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.41.9e-282772247
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+
  RDY05124.1 27 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLF 72
                8*******************************************97 PP
2K-box93.14.6e-3186169184
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                 y++++ +++++ ++e+++ e+akLk+++e Lq++qR+++G+dL+ Ls+keLq+Le+qL+++lk+iRs+Kn+l++e+i+el kk 
  RDY05124.1  86 YAERQLVANDQPQSENWTLEHAKLKARLEVLQKNQRNFMGQDLDGLSIKELQNLEHQLDSALKHIRSRKNQLMYESISELHKKV 169
                 5677888899999********************************************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MNRRGDSGSC WFASLSDSHS DREIWXRIEN KINRQVTFSK RRSGLLKKAH EISVLCDAEV  60
ALIVFSTKGK LFDMERILER YERYSYAERQ LVANDQPQSE NWTLEHAKLK ARLEVLQKNQ  120
RNFMGQDLDG LSIKELQNLE HQLDSALKHI RSRKNQLMYE SISELHKKVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-79MIKC_MADS family protein