PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05418.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 102aa MW: 11897.1 Da PI: 9.2826

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	90.1	2.8e-28	8	80	2	74
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvy 74 CaaCk++rrkC+++C lapyfpa+qpk f n+hklFG++n++k+lk l++ ++++am+s++ + + r + P + RDY05418.1 8 CAACKHQRRKCTSECLLAPYFPADQPKVFFNFHKLFGVNNIVKILKMLEPIQKKIAMDSIIIQTNYRDKYPLH 80 *******************************************************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence
MKRKVPLCAA CKHQRRKCTS ECLLAPYFPA DQPKVFFNFH KLFGVNNIVK ILKMLEPIQK 60 KIAMDSIIIQ TNYRDKYPLH YQTWLAEGEL EGGLCKVQLE VE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-31	LBD family protein