PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05426.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 144aa MW: 16386.5 Da PI: 7.7319

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123	1.5e-38	4	103	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk +rr+C++dC+++pyfpa++p++f +vh+++G snv k+l+++p+ re+a+++l++eA+ r++dPvyG+vg+i+kl qq+++++ l ++++ RDY05426.1 4 RCAACKNQRRRCPSDCIFSPYFPANDPQRFTCVHRIYGGSNVGKMLQQIPPYLREEAANTLYFEAQSRIQDPVYGCVGIISKLYQQIHETEIALTQIQT 102 6****************************************************************************************9999988887 PP DUF260 100 e 100 + RDY05426.1 103 Q 103 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MSGRCAACKN QRRRCPSDCI FSPYFPANDP QRFTCVHRIY GGSNVGKMLQ QIPPYLREEA 60 ANTLYFEAQS RIQDPVYGCV GIISKLYQQI HETEIALTQI QTQIACHRLQ DPQVKPESNF 120 DVLPPQSTST SSESQLPSQF PWFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-45	LBD family protein