PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY05440.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 244aa    MW: 28162.3 Da    PI: 5.5805
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY05440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-193688456
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++f++eq++ Le  Fe+++++  +++ +LA+ lgL+ rqV +WFqNrRa++k
  RDY05440.1 36 KRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWK 88
                568*************************************************9 PP
2HD-ZIP_I/II120.68.2e-3934125192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  e+krr+s+eq+++LE  Fe+e+kLep++K++lar+Lglqprqva+WFqnrRAR+k+k++E++y++Lk++yd+l+++ e+L+ke+e+L+ e +
   RDY05440.1  34 ENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKESLQLEFQ 125
                  58*************************************************************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MMEGEENIQA SSKGKNVENF TCLEAPRKKN KKIENKRRFS DEQIRSLECI FESESKLEPR  60
KKMQLARDLG LQPRQVAIWF QNRRARWKSK RIEQEYRKLK DEYDNLASRF ESLKKEKESL  120
QLEFQKLSDL VVTSQSHDGG REDKGGKENS IEDGGSGSGY SSWKPEAKPR FSNEGLEERI  180
GVCSDDQNEN SIIRSEKSED KEHQQILRMD DDHAEMPLAS LEKWYSSVDP SGILDQSCSS  240
SQCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-41HD-ZIP family protein