PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05574.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 231aa MW: 25487.9 Da PI: 8.7251

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.7	3e-36	38	139	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+ rrkC ++C++apyf +eq +++fa+vhk+FG + v+k+l+++ ++r+++++sl+yeA+ar+ dPvyG+++ i + q+q+++l+ael +++ RDY05574.1 38 PCGACKYIRRKCHNQCIFAPYFVSEQgSAQFAMVHKVFGINSVSKMLSNVAVDHRQEVVASLLYEAQARLADPVYGCLSAIVAFQKQVASLQAELLMRQ 136 7*********************9989*****************************************************************9999 PP DUF260 99 eel 101 ++l RDY05574.1 137 NQL 139 875 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MADQPQKGGD EATSRVTNKR KGKGTNKEHP KSEVTSPPCG ACKYIRRKCH NQCIFAPYFV 60 SEQGSAQFAM VHKVFGINSV SKMLSNVAVD HRQEVVASLL YEAQARLADP VYGCLSAIVA 120 FQKQVASLQA ELLMRQNQLI NTRISYATLL QSIQQQPQPN INVVVQPTYS NNSPNSTNLM 180 SFSNPGFDHL AMQTASSSHN LEPLQFSGLP QNEEESRIPQ VFNNGMAHLI P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	1e-49	LBD family protein