PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY05918.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 325aa MW: 36800.7 Da PI: 6.6207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY05918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d ++++G +W++ ++ g++R++k+c++rw +yl RDY05918.1 14 KGPWTPEEDQKLIDHIQKYGHASWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	57.8	2.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++d+++ lG++ W++Ia++++ gRt++++k++w+++l RDY05918.1 67 RGKFSQEEEQTILDLHAILGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MGRSPCCDEI GLKKGPWTPE EDQKLIDHIQ KYGHASWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILD LHAILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 YDPMTHQPRT DDIFSGLSHL IALANLKELL DHHHHQPWEQ NLARLQQETV QLARLQCLQQ 180 HLLMQPQAST GTDPNTNSVN SSFMNKDTNT INVSNDQFEN TMSSNGIGIV QLVNDSIPFS 240 HMPNLTTPPS CSYEAPLSNN KDMVQLFQGE SYPNSPWLLS CSSTTLSSPS HVVPPVTEVS 300 LTNMEDNCTI WPELLLEDPL FKMIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	3e-96	MYB family protein