PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY06167.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 440aa    MW: 49648.5 Da    PI: 7.5514
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY06167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.4e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l+++++++G g+W+++++  g+ R++k+c++rw +yl
       RDY06167.1 14 KGLWSPEEDDKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                     678*******************************************97 PP
2Myb_DNA-binding42.91.1e-1367110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+  ++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
       RDY06167.1  67 RGAFSQQEENMIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDDKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENMIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPNTHKALC EVEKEKEKEK EKDMADSTST DKSNQKASVG SNEVSLVDHP AKAMPLEVST  180
SSTQELFLDR FGTTCHDNNT CRPSDVLGSY FSFQHYGTNM SLSANPNTSL SFIPASTSSD  240
LNNSMLHSIF PTHVKLQSSN NPSSISSDGV LNWEPSSFSN NSNNTNKNNG SIQLQSSTNF  300
LDNTWGVAES FKFNINKDAQ VPLQAEQEDL KWSEYLNTPF MLAHNQSSQS IYTDVKPETG  360
FITDESCTSW HHQPPAFQLS DIYTKDLQRL SVTFRQTLVI QLYTLHTTQT WIDLITNSTV  420
VATIGTKRQI PHTNFCLATD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.11e-102MYB family protein