PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY06269.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 366aa MW: 41341.5 Da PI: 6.1081

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY06269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.00011	289	311	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ RDY06269.1 289 FMCRKCGKAFAVRGDWRTHEKNC 311 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MADPYSNFFS PGFFHYPSPN PSPHHHPYVH NFINQAATTN INHDTFFHFH HHFQTTITSS 60 SPPSPPLREA LPLLSLSPTK QEEEEEQEEE DQDQDQDQFC THAMDMEEDN CNRTLHFKEE 120 EQEEDGGDDG VTVALHIGLP SPSAAEIASV LSSACSTDKE QQQGGGDGNN NGSEDSSSGF 180 LSNRLNKGQY WIPTPSQILI GPTQFSCPVC CKTFNRYNNM QMHMWGHGSQ YRKGPESLRG 240 TQPTGMLRLP CYCCSPGCRN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM CRKCGKAFAV 300 RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHIKAFGSGH AAYGIDGFEE EEEPASEVEQ 360 DNESNQ

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MADPYSNFFS PGFFHYPSPN PSPHHHPYVH NFINQAATTN INHDTFFHFH HHFQTTITSS  60
SPPSPPLREA LPLLSLSPTK QEEEEEQEEE DQDQDQDQFC THAMDMEEDN CNRTLHFKEE  120
EQEEDGGDDG VTVALHIGLP SPSAAEIASV LSSACSTDKE QQQGGGDGNN NGSEDSSSGF  180
LSNRLNKGQY WIPTPSQILI GPTQFSCPVC CKTFNRYNNM QMHMWGHGSQ YRKGPESLRG  240
TQPTGMLRLP CYCCSPGCRN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM CRKCGKAFAV  300
RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHIKAFGSGH AAYGIDGFEE EEEPASEVEQ  360
DNESNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-125	C2H2 family protein