PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY06325.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 25731.1 Da    PI: 6.5244
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY06325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.44.5e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+eys+
  RDY06325.1  9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSN 59
                68***********************************************95 PP
2K-box50.11.2e-17931722099
       K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 + ++L ke+ +  + +R+l GedL+ L+++eLqqLe+ Le++l ++ +kK e ++++i +lq+k   l een++L++ ++
  RDY06325.1  93 NCSRLSKEVAEKSHRLRQLRGEDLQGLNIEELQQLERSLETGLGRVIEKKGERIMSEIADLQRKGMLLMEENERLKRHVA 172
                 5678888888888999************************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYSNS  60
SMKEILERHH LHSKNLARLE QPSLELQLVE NSNCSRLSKE VAEKSHRLRQ LRGEDLQGLN  120
IEELQQLERS LETGLGRVIE KKGERIMSEI ADLQRKGMLL MEENERLKRH VADIIDGQRH  180
GGAESENFVM DEGQSSESVT YVCNSTGPPQ DYESSDTSLK LGLPYSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-118MIKC_MADS family protein