PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY08399.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 252aa    MW: 28033.9 Da    PI: 6.6237
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY08399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.42.5e-20162205245
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 
                 r en+  r  t++kR+ngi+KKA+ELS+LCd+++ +++fs+tgk
  RDY08399.1 162 RLENTNGRLATYAKRKNGIMKKASELSILCDIDIILLMFSPTGK 205
                 6799999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MKRGTQFEVD AGNEQPGAAQ DAYVDVRVGD RDLVEEEIEE RVEMGVGVAR EERREHVQDA  60
AHGGARDAQG GEAPCHGFHG RERGGPESFE VHNLFAEYEA AVRGCGSLAT GASVLEELRR  120
EFHVVDDQDN VVVFCAFAFS VCLFINTMLI KGMGRVKLKI RRLENTNGRL ATYAKRKNGI  180
MKKASELSIL CDIDIILLMF SPTGKPSLCR GKRRFDSLSN YSLPFIIGHS NFEEVIAKFA  240
QLTPQERAKR CI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.28e-26M-type_MADS family protein