PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY08515.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 222aa    MW: 24816.5 Da    PI: 9.8669
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY08515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.92.7e-231664149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ +n+sn qvtfskRr g++KKA+EL++LC+a+va+i+fs+  k++ +
  RDY08515.1 16 KKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALIVFSPGEKVFSF 64
                5689***************************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSSAKKSRGR QKVEMKKMSN ESNLQVTFSK RRSGLFKKAS ELCTLCGADV ALIVFSPGEK  60
VFSFGHPNVD AVIDRYLARA PPPNSGTMQF LEAHRMANLS GLNAQLTEMN NQLDEERKRH  120
EELARLKKGA QAQMWWALPI EEMSRAQLEQ YKVALEELKK HVPRLADGAM LQSAMKPPQF  180
YPGASSSSNI VHQPHPPSPQ ALLVSCRWHV STYPASDIPD MS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-64M-type_MADS family protein