PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08916.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 166aa MW: 18047.4 Da PI: 7.8619

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	144.7	2.8e-45	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++l e++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la++++ RDY08916.1 14 PCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLRTQLAVAQA 112 7**********************************************************************************************9997 PP DUF260 100 e 100 e RDY08916.1 113 E 113 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MKDGGGRKQG APSPCAACKL LRRRCAQDCV FAPYFPADEP QKFANVHKVF GASNVNKMLQ 60 DLAEHQRGDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI DVLRTQLAVA QAEAVHLRVR 120 QSASLYSPTS PSNSGSPSSK IIESQPNPIF DMDMVVDQTT YGDSIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	9e-71	LBD family protein