PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY08964.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 388aa MW: 42305.6 Da PI: 8.194

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY08964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.3	3.8e-27	39	134	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++++ e r+r g+ + +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + ++l+ RDY08964.1 39 RWTRQEILVLIQGKSDAEGRFRPGRgsggsgsafgSSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLR 134 8*******************8766678888888*******************************************9999999998888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MALDQPSNPN SVDGAGNGAT PCSAADGGDD GRPAARLPRW TRQEILVLIQ GKSDAEGRFR 60 PGRGSGGSGS AFGSSEPKWA LVSAYCKKHG VNREPVQCRK RWSNLAGDYK KIKEWESQVR 120 DETESFWLMR NDLRRERKLP GYFDREVYNI LDSPSTAAAA ETPVAAPAGD EEVHLYDSNR 180 RVGGEDGLFS DSEKDEVLLL AAAKDVAAPV PISGSRFNLV GKGLVDIIVV GIRSNINRSS 240 KAAKGKAMVK DQRFCFDNHS VKDLAGATNE KRPALNPEMG STSQGGRKRK RLATDGEEET 300 LQSQLIDVLE KNGKMLRDQL EAQNINFQLD RQQQKDTASN IVAVLDKLAD ALGRIADKLL 360 CIPEQSNPLL TVLNRSLGIK LDLTNVPL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MALDQPSNPN SVDGAGNGAT PCSAADGGDD GRPAARLPRW TRQEILVLIQ GKSDAEGRFR  60
PGRGSGGSGS AFGSSEPKWA LVSAYCKKHG VNREPVQCRK RWSNLAGDYK KIKEWESQVR  120
DETESFWLMR NDLRRERKLP GYFDREVYNI LDSPSTAAAA ETPVAAPAGD EEVHLYDSNR  180
RVGGEDGLFS DSEKDEVLLL AAAKDVAAPV PISGSRFNLV GKGLVDIIVV GIRSNINRSS  240
KAAKGKAMVK DQRFCFDNHS VKDLAGATNE KRPALNPEMG STSQGGRKRK RLATDGEEET  300
LQSQLIDVLE KNGKMLRDQL EAQNINFQLD RQQQKDTASN IVAVLDKLAD ALGRIADKLL  360
CIPEQSNPLL TVLNRSLGIK LDLTNVPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-77	Trihelix family protein