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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY09115.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 268aa MW: 30139 Da PI: 10.1016 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 62.7 | 8e-20 | 29 | 78 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ +g+WvAeIr+p++ r+r +lg+f taeeAa a+++a+++l+g
RDY09115.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
69****999.**********965...5*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 268 aa Download sequence |
MDTCKKSPLK PWKKGPTRGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA 60 TAEEAAMAYD EAARRLYGPD AYLNLPHLTN STSHITSGKF KWIPSKNFIS MFPSHRLLNI 120 NAQPSVHLIN QRIQELKRNS VVSQSPSGSS NGPKEEIQNV DSKNHGKNPP KEAQTSSSEV 180 LGDLQEKPQI DLHEFLQQLG ILKEERQSER TDSSGSSTVP EAVLRDDNDQ LGVFSDKSVN 240 WEALIEMHGI AGQSLVYHRG IKMAQRIR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G57600.1 | 3e-70 | ERF family protein | ||||




