PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09386.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 343aa MW: 37996.1 Da PI: 7.1913

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl RDY09386.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l RDY09386.1 67 RGKFSMQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLERCG KSCRLRWTNY 60 LRPDIKRGKF SMQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPVTHKPKN DALLSSEGPS KTAANLSHMA QWESARLEAE ARLVRESKLR TSHSSSSSSA 180 PILPSSLSLD HAWNNNGGST TMITSDLESP TSTLSENNAP PVMTSVASSE RGTMKEEAEQ 240 EWKGYEYKDG IENSMPFTTS TSHAHAHAHP HVAHHGFTGL LLNTNSADRS LSSDGAGDSN 300 NYHANHGANN GGADGELYEE NKHYWNNILN LMNYSSPSDS PMF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLERCG KSCRLRWTNY  60
LRPDIKRGKF SMQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG  120
IDPVTHKPKN DALLSSEGPS KTAANLSHMA QWESARLEAE ARLVRESKLR TSHSSSSSSA  180
PILPSSLSLD HAWNNNGGST TMITSDLESP TSTLSENNAP PVMTSVASSE RGTMKEEAEQ  240
EWKGYEYKDG IENSMPFTTS TSHAHAHAHP HVAHHGFTGL LLNTNSADRS LSSDGAGDSN  300
NYHANHGANN GGADGELYEE NKHYWNNILN LMNYSSPSDS PMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-124	MYB family protein