PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09411.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 277aa MW: 31473.8 Da PI: 4.5369

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.8e-19	58	111	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA++lgL+ rqV vWFqNrRa++k RDY09411.1 58 KKRRLSVDQVKALEKNFEVENKLEPDRKVKLAHELGLQPRQVAVWFQNRRARWK 111 566899***********************************************9 PP
2	HD-ZIP_I/II	129.7	1.1e-41	57	149	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++y++lk + ++L++++++L +e+ke RDY09411.1 57 EKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAHELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKSNYETLKLSYDTLQQDNQALLKEIKE 149 69**************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MKRLGSSDSL GALITICPPT EEQSPRKNRH VYGREFQSML EGLDEEGCVE EAGQHAEKKR 60 RLSVDQVKAL EKNFEVENKL EPDRKVKLAH ELGLQPRQVA VWFQNRRARW KTKQLERDYG 120 VLKSNYETLK LSYDTLQQDN QALLKEIKEL KSRVEGENTE SDASVKEEMT TVQDSDPLCE 180 TAIPGSDSKV KDGSSDSDSS AILNDENNNN AAISSCGILQ SDEGLVSSPS CFQYQKQYQT 240 QYVKMEEHNF LSADEACNFF SDEQPPTLQW YCSEEWG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	58	87	KKRRLSVDQVKALEKNFEVENKLEPDRKVK
2	106	114	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	6e-78	HD-ZIP family protein