PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY09523.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 248aa    MW: 27909.2 Da    PI: 8.4933
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY09523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.13.5e-1991143254
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 rk+ ++tkeq + Lee F++n++++ +++e LA++l+L  rqV vWFqNrRa+
  RDY09523.1  91 RKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRAR 143
                 78889***********************************************9 PP
2HD-ZIP_I/II107.21.2e-3491185189
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR......tktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                  +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR       k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+
   RDY09523.1  91 RKKLRLTKEQSRLLEESFRQNHTLNPKQKESLAMQLKLRPRQVEVWFQNRRARdamqcrSKLKQTEMECEYLKRWFGSLSEQNRRLQREVEELRA 185
                  69*************************************************9644443379********************************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
ILLLFFITTV IFCVPSMAVL PSSSSSLELT ISVPGFASSP TLLPSSSVHI YKAVFGITVK  60
ELDMNQVPLE EDWMTSNMED EDESSNGDPP RKKLRLTKEQ SRLLEESFRQ NHTLNPKQKE  120
SLAMQLKLRP RQVEVWFQNR RARDAMQCRS KLKQTEMECE YLKRWFGSLS EQNRRLQREV  180
EELRAMKVGP PTVISPHSCE PLPASTLTMC PRCERVTTTT DKALAAAATL SAKVPAPALQ  240
SRQPSAAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.18e-67HD-ZIP family protein