PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY09602.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 478aa MW: 54112.6 Da PI: 5.8345

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY09602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.9	2.4e-22	117	213	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 +Wt++ v++Li++++ ++++ g +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++t ++++++ ++ d++ RDY09602.1 117 KWTDNVVKLLITVVSCVGDDGTIGGmdghkrktgalQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTcCQVVENPALMDSM 213 7************666666654333444455567********************************************757888888887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MNSSGLGGGF LSGPSGVILD LESPFHRHQQ TQLGHPSITG QQHMNIMSGL ENDHCLIEVK 60 SLNAALNFSK GKEIAPSNPA NSNELSEEDE PSHAEEGNCE NFDGGKSKKG SPWQRMKWTD 120 NVVKLLITVV SCVGDDGTIG GMDGHKRKTG ALQKKGKWKT VSKIMISKGC HVSPQQCEDK 180 FNDLNKRYKR LNDILGRGTC CQVVENPALM DSMPNLSAKM KDDVRKILSS KHLFYKEMCA 240 YHNGQRIPDC HELDLQGYSL EHGRDSRDNN GSEDEDEDNN ESEDEELDDE ININAHEDGG 300 RMHELCDRNK LSEEDGHFGP QTSRMDKFEV EMARVFQDPT KSLHDRREWI KIQMLQLQEQ 360 NISYQGQALE LEKQRFKWLR YCSKKDRELG RLRLENKRMT LENERRILKL KQKELETDFS 420 NSEMSLDPAS LGINPSQGRE HISLGRQHAA GLATELRNDF AGNTEIEGCC FKALELLL

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MNSSGLGGGF LSGPSGVILD LESPFHRHQQ TQLGHPSITG QQHMNIMSGL ENDHCLIEVK  60
SLNAALNFSK GKEIAPSNPA NSNELSEEDE PSHAEEGNCE NFDGGKSKKG SPWQRMKWTD  120
NVVKLLITVV SCVGDDGTIG GMDGHKRKTG ALQKKGKWKT VSKIMISKGC HVSPQQCEDK  180
FNDLNKRYKR LNDILGRGTC CQVVENPALM DSMPNLSAKM KDDVRKILSS KHLFYKEMCA  240
YHNGQRIPDC HELDLQGYSL EHGRDSRDNN GSEDEDEDNN ESEDEELDDE ININAHEDGG  300
RMHELCDRNK LSEEDGHFGP QTSRMDKFEV EMARVFQDPT KSLHDRREWI KIQMLQLQEQ  360
NISYQGQALE LEKQRFKWLR YCSKKDRELG RLRLENKRMT LENERRILKL KQKELETDFS  420
NSEMSLDPAS LGINPSQGRE HISLGRQHAA GLATELRNDF AGNTEIEGCC FKALELLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-70	Trihelix family protein