PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY09869.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HB-PHD
Protein Properties Length: 722aa    MW: 81883 Da    PI: 9.4594
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY09869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82.2e-095025441153
                 HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                  +e L ++F++n  p ++ +  L+++lgL+ ++V+ WF+N R+
  RDY09869.1 502 AVEKLRQVFAENELPPKSVKDNLSEELGLDPEKVSKWFKNARY 544
                 5789*************************************97 PP
2PHD39.71.1e-13236291151
                 SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
         PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                 +C+ C+   +  +++++lCd +C+++fH+ Cl+++l++e++p g   w+C+ C++k
  RDY09869.1 236 FCANCKLheAFPDNDIILCDgTCNRAFHQRCLNPPLDTENIPPGdqGWFCKFCECK 291
                 699999954445********56********************9999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MRDAGSLNNK GSGKSSYSKD QTKSKQVSSK FKTSSTKRQG KKHKVKSKSH KHRVGTNTSK  60
KTVTDSSIKA SLDNSSNKKV IIRKNLDKTD GKSSQQMLSS TKLQGGKNSR SSRKEGNDVD  120
GEAKIQKRKR RRKKKRQRDN MDLDDASRLR RRTRYLLIKM KLEQNLIDAY SGEGWKGHSR  180
EKIRPEKELL RAKKQILKCK LGIRDAIHQL DSLSSVGSIE DSAIAPDGSV YHEHIFCANC  240
KLHEAFPDND IILCDGTCNR AFHQRCLNPP LDTENIPPGD QGWFCKFCEC KIEILEATNA  300
HLGTQFSLDS SWQDVFKEEA AMPDGDIALL NPEEEWPSDD PEDDDYNPER KEDSHSINPD  360
GDDENASNDL SSSSSLWSLN GESSPVNEGI SHEYYSVNSC IDSDESGEIT CGRRQRKAVD  420
YKKLYDEMFG KDAPPCEQVS EDEDWGPGKR KRREKESDAV NTLMTLHESE NKYPNNENNV  480
RIRDSSSGIQ IKRSCFRIPL DAVEKLRQVF AENELPPKSV KDNLSEELGL DPEKVSKWFK  540
NARYLALKTR RYQAEGEQLQ SITSKISKDS ISQNEEKDEL LKPKVSKITV IHSQKEDGKI  600
ITGKEKNKLS RSLLKKSKPK ISPPLAKESS NKDSMEVSDD VKLKKLLKKR KRRIKFIFEG  660
DSQAAAELEF ERLSKVKIKL DSMKQKLTEV QNCRSKGSNK LDSNETSSII YVPTAELREK  720
AE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126132QKRKRRR
2127132KRKRRR
3127133KRKRRRK
4127135KRKRRRKKK
5128134KRKRRRK
6128136KRKRRRKKK
7128132RKRRR
8128135RKRRRKKK
9129135KRKRRRK
10130136KRKRRRK
11130136RRRKKKR
12131136RRKKKR
13131161RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
14131137RRRKKKR
15132162RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
16133138KKKRQR
17133163RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
18450455RKRREK
19643651LKKLLKKRK
20645651KLLKKRK
21647653LKKRKRR
22648653KKRKRR
23648678RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
24649679RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
25650680RRKKKRQRDNMDLDDASRLRRRTRYLLIKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.21e-153HB-PHD family protein