PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY10914.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 365aa MW: 41439.3 Da PI: 6.6868

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY10914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W++ ++ g+ R++k+c++rw +yl RDY10914.1 14 KGPWTPEEDQKLIDYIQKHGFGNWRLLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.1	3.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ RDY10914.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIASRIP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGRSPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGFGNWRLL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIASRIPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHRPRL DLLDLSSILS SSLCGSTQMN NIQRLLGTHT VFNPELLKLA SSLFFQQREN 180 LNMCAQNSEQ NHLCDSHVQN QIPHLVQSQD LPQEACTTAC NTMNPPCASL SSLPFTQPQL 240 VESNMNPYPS TFHDSGFQQH SQLSDSWHCN GIDTSYVPQL LCYNYQGYDY GTNLMDPPMS 300 ESSTFHSHNS NQNFSLASSS PTPLNSNSTY VNGSSSTTED ETESYVSSNL LRFEFSEMLG 360 VNEFI

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGRSPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGFGNWRLL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIASRIPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHRPRL DLLDLSSILS SSLCGSTQMN NIQRLLGTHT VFNPELLKLA SSLFFQQREN  180
LNMCAQNSEQ NHLCDSHVQN QIPHLVQSQD LPQEACTTAC NTMNPPCASL SSLPFTQPQL  240
VESNMNPYPS TFHDSGFQQH SQLSDSWHCN GIDTSYVPQL LCYNYQGYDY GTNLMDPPMS  300
ESSTFHSHNS NQNFSLASSS PTPLNSNSTY VNGSSSTTED ETESYVSSNL LRFEFSEMLG  360
VNEFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-96	MYB family protein