PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY10951.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family LBD
Protein Properties Length: 189aa    MW: 20654 Da    PI: 6.755
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY10951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26079.17.5e-252122197
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeer...................edamsslvyeAearardPvyG 75 
                 +C++C+vlr++C++dC+l+ ++     p+ q +++ +v+k+FG++ ++++l+a+p ++r                    ++++sl+yeA  r+ +Pv+G
  RDY10951.1   2 SCNGCRVLRKGCSEDCMLRHCLlwienPQGQGHATLFVAKFFGRAALMSFLSAVPANQRsvfvcvslksceltvdmeqAALFESLLYEAVGRTINPVNG 100
                 6***************************************************************************99999****************** PP

      DUF260  76 avgvilklqqqleqlkaelall 97 
                 avg++++++++l+q+ +e +l+
  RDY10951.1 101 AVGLLWSGNWHLCQMGVEKVLR 122
                 **************99887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSCNGCRVLR KGCSEDCMLR HCLLWIENPQ GQGHATLFVA KFFGRAALMS FLSAVPANQR  60
SVFVCVSLKS CELTVDMEQA ALFESLLYEA VGRTINPVNG AVGLLWSGNW HLCQMGVEKV  120
LRGAAALTPL PHLLPQHQLV TDRVMVPSEI LCHQPRVGTP SEESEMSTLA STPPDSAPQS  180
QTNLLTLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.12e-53LBD family protein