![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RDY11075.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
| Family | ERF | ||||||||
| Protein Properties | Length: 195aa MW: 21080.6 Da PI: 9.8403 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 65.9 | 7.7e-21 | 25 | 75 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a++aa+++++g+
RDY11075.1 25 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDAAAREFRGA 75
59*******.**********8...557*************************985 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 195 aa Download sequence |
MAPRDNNRSN VVAGPNSTHL AKEIRYRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE 60 AARAYDAAAR EFRGAKAKTN FPTHAELTHG AARSPSQSST LESSSPPPLD LTLAPLAAAS 120 ALVFPVARPV LFFDAFARTE MGAFDLPAVG FRRGAVDGAG TQSDSDSSSV VDYERVPHRR 180 VLDLDLNVPP PPEVA |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G15210.1 | 6e-28 | ERF family protein | ||||




