PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11758.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 110aa MW: 12858.8 Da PI: 4.9538

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20.3	9.5e-07	10	36	1	27
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C f rtG Ck + C F+H++ RDY11758.1 10 PGESECISFKRTGDCKLKSECMFHHPK 36 57899********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence
MQVDEFPERP GESECISFKR TGDCKLKSEC MFHHPKNRIA RLPPSPPCLN DMGLPLRPLF 60 PNNYDLWAVK MEVYLEALDL WEVVEEDYEV LPMPDNPTMA QIKNHKEKKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48440.1	1e-17	C3H family protein