PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11780.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 513aa MW: 56176.8 Da PI: 8.4987

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	88	110	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H RDY11780.1 88 FICEICNKGFQRDQNLQLHRRGH 110 89*******************88 PP
2	zf-C2H2	12.1	0.0006	164	186	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ RDY11780.1 164 WKCDKCSKKYAVQSDWKAHSKTC 186 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
FMEIKGFMFN QQQVVEENMS NLTSASGEAS ASSGNRTEIG TSYPQQYLAP PPTQTQPAKK 60 KRNLPGNPDP DAEVIALSPK SLLATNRFIC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT 120 SKEVRKKVYV CPEPTCVHHD PSRALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK 180 AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAEESA RAMTGTGNPQ PCSSQHHHIS 240 LQTQFNPQEI HAFPMKREQL SFNGRPEIIP PWLGPPTTVD HLSSPSSIIF SPPPHQENPN 300 PSLGPTLAAY QTVSPHMSAT ALLQKAAQMG ATMSRNASSP AMTRAHHQVH VSSSADSATA 360 HFGLNLSSRE DTTTTTTTST TTPTTNTATV FSHGHGLLLT SPLGNKAATT VSSSAAPSLL 420 HDVINSFSSP SAFEGTPFED AFGGIQNSKK LDDDDDNLYL HDTFSKTSAA GNEGLTRDFL 480 GLRPLSHTDI LTIAGIGNCI HDQQNQSQKP WQG

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

FMEIKGFMFN QQQVVEENMS NLTSASGEAS ASSGNRTEIG TSYPQQYLAP PPTQTQPAKK  60
KRNLPGNPDP DAEVIALSPK SLLATNRFIC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT  120
SKEVRKKVYV CPEPTCVHHD PSRALGDLTG IKKHFCRKHG EKKWKCDKCS KKYAVQSDWK  180
AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAEESA RAMTGTGNPQ PCSSQHHHIS  240
LQTQFNPQEI HAFPMKREQL SFNGRPEIIP PWLGPPTTVD HLSSPSSIIF SPPPHQENPN  300
PSLGPTLAAY QTVSPHMSAT ALLQKAAQMG ATMSRNASSP AMTRAHHQVH VSSSADSATA  360
HFGLNLSSRE DTTTTTTTST TTPTTNTATV FSHGHGLLLT SPLGNKAATT VSSSAAPSLL  420
HDVINSFSSP SAFEGTPFED AFGGIQNSKK LDDDDDNLYL HDTFSKTSAA GNEGLTRDFL  480
GLRPLSHTDI LTIAGIGNCI HDQQNQSQKP WQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	127	KLKQRTSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-107	C2H2 family protein