PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11888.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 564aa MW: 61555.5 Da PI: 6.6063

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.8	2.8e-42	177	252	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls +k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q RDY11888.1 177 CQVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 252 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MESWSYVGEE KGYVSSEALS PPNTLGRSKG SFLGWELKTP CSFSNDMGQQ NVEDQDFEEL 60 GFPGMLGKQL CGDPIGTVQS RKVDDVVECR ITSPSPVVPA PNSFSAREDF NSKLSNSLRD 120 SNGGNSLIDL KLGRFADHGD AMVPTFSKGA PILSSSESST PTKRVRASGV HSQTAYCQVY 180 GCNKDLSGCK DYHKRHKVCE VHSKTSKVIV NGIEQRFCQQ CSRFHLLAEF DDGKRSCRKR 240 LAGHNERRRK PQVGIHSGKA GRLLQPYGDS RFQDTMLTSS FICQEILPSG VLSSEKYGAS 300 DWWRPIKAED STGFTFRPLS SIPLTNGHPQ SRSLFPSYGE KQLQFLHENG ATSATGNIFS 360 ENNNQYHPPS LGGQNSGSQS LFQDTSLGSE DFNVFDTESA VQGLSGISDS GCALSLLSSQ 420 SQNSSSQSSG IPMARPIVIP SSHSHYSMSQ VSEKMMGISS QASSGVSDRF PSEFNPADGS 480 HLSPILISDN NEIVNFEMAD GIFQGSDFVN VKDRLSCEDG LTINLLQLSS QLQRVEHQRQ 540 SLQTPIPVIL FLNNVGHSGE KLKM

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MESWSYVGEE KGYVSSEALS PPNTLGRSKG SFLGWELKTP CSFSNDMGQQ NVEDQDFEEL  60
GFPGMLGKQL CGDPIGTVQS RKVDDVVECR ITSPSPVVPA PNSFSAREDF NSKLSNSLRD  120
SNGGNSLIDL KLGRFADHGD AMVPTFSKGA PILSSSESST PTKRVRASGV HSQTAYCQVY  180
GCNKDLSGCK DYHKRHKVCE VHSKTSKVIV NGIEQRFCQQ CSRFHLLAEF DDGKRSCRKR  240
LAGHNERRRK PQVGIHSGKA GRLLQPYGDS RFQDTMLTSS FICQEILPSG VLSSEKYGAS  300
DWWRPIKAED STGFTFRPLS SIPLTNGHPQ SRSLFPSYGE KQLQFLHENG ATSATGNIFS  360
ENNNQYHPPS LGGQNSGSQS LFQDTSLGSE DFNVFDTESA VQGLSGISDS GCALSLLSSQ  420
SQNSSSQSSG IPMARPIVIP SSHSHYSMSQ VSEKMMGISS QASSGVSDRF PSEFNPADGS  480
HLSPILISDN NEIVNFEMAD GIFQGSDFVN VKDRLSCEDG LTINLLQLSS QLQRVEHQRQ  540
SLQTPIPVIL FLNNVGHSGE KLKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-52	SBP family protein