PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY11905.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 317aa MW: 35988.7 Da PI: 5.4068

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY11905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.9	4.1e-19	119	172	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q+ Le+ F +++++ +++++LAk lgL+ rqV +WFqNrRa++k RDY11905.1 119 KKRRLSANQVLFLEKSFDQDNKLEPDRKTKLAKDLGLQPRQVAIWFQNRRARWK 172 56689************************************************9 PP
2	HD-ZIP_I/II	125.4	2.6e-40	118	210	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls++qv +LE+sF++++kLep+rK++la++Lglqprqva+WFqnrRAR+ktkq+Ekdye+L+++y++l+++ ++L ke+++L++++++ RDY11905.1 118 EKKRRLSANQVLFLEKSFDQDNKLEPDRKTKLAKDLGLQPRQVAIWFQNRRARWKTKQMEKDYETLHHSYQTLRANYDNLLKEKDNLKAQVAS 210 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MSEGHDSGCE SWVYPAAVPT PPTSLRSSSP ASSATSLRSF HYFDTLRPMA ASPPNLSNNT 60 CFLPNSEPLF LSSSSYPFLG SRSMVSFEGE GGKGSFFRAF DMDDNGEDCM EDYFHQPEKK 120 RRLSANQVLF LEKSFDQDNK LEPDRKTKLA KDLGLQPRQV AIWFQNRRAR WKTKQMEKDY 180 ETLHHSYQTL RANYDNLLKE KDNLKAQVAS LTEKVVARGK QEGEEAKRGS LMESVSEDIS 240 TGRSDIMDSE SPHSALLEPA HQSELSQEQQ QHNPTNPLYP SSYLFPKLED VDYSHPPHTS 300 SNFGFPDEDH ALWTWAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	148	KKRRLSANQVLFLEKSFDQDNKLEPDRKTK
2	167	175	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-42	HD-ZIP family protein