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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY11954.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | TALE | ||||||||
| Protein Properties | Length: 967aa MW: 108291 Da PI: 6.0622 | ||||||||
| Description | TALE family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 28 | 3.8e-09 | 355 | 392 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +e+ LA+++gLt +qV +WF N R +
RDY11954.1 355 FEHflHPYPKDSEKIMLARQTGLTRNQVANWFINARVR 392
664459******************************88 PP
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| 2 | Homeobox | 28.7 | 2.2e-09 | 890 | 927 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe ++yp+ +e+ LA+++gLt++qV++WF N R +
RDY11954.1 890 FEHflHPYPNDSEKLMLASQTGLTKNQVSNWFINARVR 927
554459******************************88 PP
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| 3 | BELL | 123.4 | 9.4e-40 | 226 | 297 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
erq+l kk+kLls+l+eVdk+Y+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi
RDY11954.1 226 ERQNLLDKKTKLLSMLDEVDKKYRQYCHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQI 297
6899999****************************************************************8 PP
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| 4 | BELL | 102.1 | 4.2e-33 | 753 | 823 | 2 | 72 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++e+q+k+a+L+sll+eV+ r ++y++q++ v+ssFe++aglg+ak Yt+lAl+a+SrhF +L+dai +qi
RDY11954.1 753 KHEHQIKIARLISLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQI 823
79*******************************************************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 967 aa Download sequence |
MYPNQAFSSG SYAEMMSGTS LLPHEYSESF AGDSHVVPRT QMGIVDSEQN MQCQGLSLSL 60 GTHMPSSASL PPFQYQYHDT GLLPLMTDFP NLKGTMSFKD DEANNLHKEL TSAECMASVS 120 SGGFHDIIKK EGFYNPHPSM CLKEYPSDLP GYSNGILNSQ YLKAAQDLLD EIVSVRKALK 180 QPGMEKQDNC RDIGLDGSKD SDGKSNSQSL QMSSGPNASS ELSPSERQNL LDKKTKLLSM 240 LDEVDKKYRQ YCHQMQIVVS SFDMVAGCGA AEPYTTLALR TISRHFRCLR DAISGQIQAT 300 QKSLGEQEGI PRLRYVDQQL RQQKALQQLG VMRQAWRPQR GLPESSVSIL RAWLFEHFLH 360 PYPKDSEKIM LARQTGLTRN QVANWFINAR VRLWKPMVEE MYKEEFGDSE MNCNLASETT 420 VKGKRDDVQE SDNNNKWEES QENLVTVESV QGQSNGENVV MDSGGGKLQG NQKQRLSMNN 480 NYCISSNNNQ NGGGESLMGS SPHGTYDISE LGNFTMGGHV SLALELRNCE SDGFTMSDDG 540 IHKRRNQTLA SSPETDLLDY HFTDSGKQQH RHNNVFPEAL GAFPEGSEIS HTRHLMDLLG 600 AANETIHHQP QGLSLSLGSH MHQRPLNPVL INPNYFMSAQ QQEPRDPPVD HLTSDYFFNT 660 AAAGTFASSS SAPLNRSPST SYAAESFAAV IGNSRYLKPV QSLLEDLVDV GGNVVDRINE 720 KYADKLFRRG GARTLSSELK AELRNNAPLL ADKHEHQIKI ARLISLLDEV EGRCEKYYHQ 780 MEEVVSSFEM IAGLGAAKCY TALALQAMSR HFCSLRDAIL SQINAEKRKL FQDLPKISSG 840 LSQLSLFDRD SRQSRMSLQQ LGVIQSQRQV WRPIRGLPET SVAILRSWLF EHFLHPYPND 900 SEKLMLASQT GLTKNQVSNW FINARVRLWK PMIEEMYKEE FGESSEDSNP AANNYLTRED 960 TTDCVED |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G75410.2 | 1e-103 | TALE family protein | ||||




