PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY12360.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 331aa    MW: 37520.1 Da    PI: 8.7535
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY12360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.8e-155097148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed++l ++++ +G g W+  +++ g++R++k+c++rw++yl
       RDY12360.1 50 KGAWTALEDKILSEYIHIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYL 97
                     79********************************************97 PP
2Myb_DNA-binding51.81.9e-16103146146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
       RDY12360.1 103 RGNITNDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 146
                      7999******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
KTCYASAGNI EYQFSPSRDH IHTYTCTCTK RKRSRSMGRS PCCSKEGLNK GAWTALEDKI  60
LSEYIHIHGE GKWRHLPKRA GLKRCGKSCR LRWLNYLRPG IKRGNITNDE EELIIRLHKL  120
LGNRWSLIAG RLPGRTDNEI KNYWNTNIGR KLQNGSPGYS SITSGGAPNT VQQDRSLKNQ  180
ERHYPYSPNN SCLVQTKATR WAKVTATKDI ISQHNEGIIN SNNVGDNKMK TFSVSPSSES  240
NNDPVLDFME DLEMDGNFFS ELLKMDLPES SCQEHKILVE ENGNPSTVNK GYLSPKSSSD  300
TTHFLWGDSL YDTNFDFLPV ASFIESGFDW L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.13e-61MYB family protein