PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY12450.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family YABBY
Protein Properties Length: 171aa    MW: 19183.7 Da    PI: 6.8675
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY12450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY165.83.2e-5161483160
       YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101
                 ++ ++eq+Cy+ CnfC+ +lavsvP + lf +vtvrCGhCt+l sv++a a q l+ ++           +  + ++ +   + + + s+s+ ++ ++ 
  RDY12450.1   6 IDVAPEQLCYIPCNFCHIVLAVSVPCSNLFDIVTVRCGHCTNLWSVDMAAAFQSLSWQDV----------QASGYSNPE---YRIDTGSTSKCNKIQM- 90 
                 66789********************************************99999998884..........222222222...2222222222222221. PP

       YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                  +  + +v++   v+rPPek+qrvPsayn+fikeeiqrika+nPdishreafs+aakn 
  RDY12450.1  91 -RAPTTHVTEERVVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNV 148
                 .22333344445689*******************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSCCSIDVAP EQLCYIPCNF CHIVLAVSVP CSNLFDIVTV RCGHCTNLWS VDMAAAFQSL  60
SWQDVQASGY SNPEYRIDTG STSKCNKIQM RAPTTHVTEE RVVNRPPEKK QRVPSAYNQF  120
IKEEIQRIKA NNPDISHREA FSTAAKNVMG TFPSYSLWAD VRKQESSLDG E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.14e-74YABBY family protein