PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY12579.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family WOX
Protein Properties Length: 244aa    MW: 27110.3 Da    PI: 6.6228
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY12579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.53.5e-211877357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++tkeq+  Le+l+++  ++psaee+++++++l    +++ ++V++WFqN++a++++
  RDY12579.1 18 SRWNPTKEQISMLENLYKQgIKTPSAEEIQQITARLraygHIEGKNVFYWFQNHKARQRQ 77
                7*****************99**************************************97 PP
2Wus_type_Homeobox115.52.6e-371779365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++RW+Pt+eQi +Le+lyk+G++tP++eeiq+ita+L++yG+ie+kNVfyWFQN+kaR+rqkq
         RDY12579.1 17 TSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQ 79
                       68***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MESGNEGMGG SNGVGGTSRW NPTKEQISML ENLYKQGIKT PSAEEIQQIT ARLRAYGHIE  60
GKNVFYWFQN HKARQRQKQK QETITFFNRF LHTPQPFFSP PICPNIHGIY APYCIGQAES  120
EIGFYPPHPK VVVPVGFKRN PSEKVVGTGM SNSNMICNGP LVYEGMQMQQ RISDCNLSYS  180
NQETLDLFPL HPTGILEGKT TTDQVSSADS STDTPSASPD INQDHGSPLN QPFFDFFTTS  240
GQAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.15e-52WOX family protein