PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12598.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 576aa MW: 63322.5 Da PI: 4.7636

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.7e-18	100	147	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l RDY12598.1 100 KGPWTTAEDAILVEYVKKHGQGNWNAVQKHSGLARCGKSCRLRWANHL 147 79******************************************9986 PP
2	Myb_DNA-binding	53.6	5e-17	153	196	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++++v++++++G++ W++ a++++ gRt++++k++w++ RDY12598.1 153 KGAFTEEEEKRIVELHAKMGNK-WARMAAELP-GRTDNEIKNYWNT 196 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
GSYDVIPDPL VAFSERFTLD WSINSAEIKN CPTLKEDFDV LATFGAGKFY IPLPFGILTA 60 MSSMTNGGDT RKISKGRRSS SLVEEASGGD NTGGEGPLKK GPWTTAEDAI LVEYVKKHGQ 120 GNWNAVQKHS GLARCGKSCR LRWANHLRPD LKKGAFTEEE EKRIVELHAK MGNKWARMAA 180 ELPGRTDNEI KNYWNTRIKR MQRSGLPIYP EELCQRILNG NQESQNVGPV PNEASQHDDF 240 SQTDNFDIPD VDFNSFKFRH GLSDGLSIFD MPESNLFEQS SDLSHSYNIL FPPTMHPPKR 300 LRESEVLYNN NFGSCTSNAF PPLFDPYGNF TCDQIPDDPR LSPPRDQVLN SSDQFHGDNL 360 TGSHAALNGN ASSSAPISGA MKLELPSLQY PETQHGSWGT PMSPLPSLES VDTLIQSPLV 420 EPILSDPISP QTSGLLEAIV FNSKSLKGSS NDLLLQEMTG TANTNEAVKN STLNPFKSEW 480 DDGEPSSPLG QSAPSVLTDY TPIIMCPVDG TQSIKTTQDH DVKHEALTQF PDSSGKKENS 540 NQIEITWPDA LFEIGWFGGS PDRSVLKNAL TALIGE

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

GSYDVIPDPL VAFSERFTLD WSINSAEIKN CPTLKEDFDV LATFGAGKFY IPLPFGILTA  60
MSSMTNGGDT RKISKGRRSS SLVEEASGGD NTGGEGPLKK GPWTTAEDAI LVEYVKKHGQ  120
GNWNAVQKHS GLARCGKSCR LRWANHLRPD LKKGAFTEEE EKRIVELHAK MGNKWARMAA  180
ELPGRTDNEI KNYWNTRIKR MQRSGLPIYP EELCQRILNG NQESQNVGPV PNEASQHDDF  240
SQTDNFDIPD VDFNSFKFRH GLSDGLSIFD MPESNLFEQS SDLSHSYNIL FPPTMHPPKR  300
LRESEVLYNN NFGSCTSNAF PPLFDPYGNF TCDQIPDDPR LSPPRDQVLN SSDQFHGDNL  360
TGSHAALNGN ASSSAPISGA MKLELPSLQY PETQHGSWGT PMSPLPSLES VDTLIQSPLV  420
EPILSDPISP QTSGLLEAIV FNSKSLKGSS NDLLLQEMTG TANTNEAVKN STLNPFKSEW  480
DDGEPSSPLG QSAPSVLTDY TPIIMCPVDG TQSIKTTQDH DVKHEALTQF PDSSGKKENS  540
NQIEITWPDA LFEIGWFGGS PDRSVLKNAL TALIGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	3e-88	MYB family protein