PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY12705.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 205aa    MW: 23446.9 Da    PI: 10.0396
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY12705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.52.7e-211663249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +i  ks  qvtfskRr g++KKA+EL++LC++e+a+i+fs+ +k + +
  RDY12705.1 16 KIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIIVFSPADKAFSF 63
                57789999*********************************9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MKRKSSSGRQ KIPIEKIPKK SHLQVTFSKR RSGLFKKASE LCTLCGVEIA IIVFSPADKA  60
FSFGHPEVES IIDCYQTRNS SLDSSSHQLV EAHRNANIRN LNMQLTQIIN QLEMEKRQGE  120
ELDRAWKARQ RQYWWEIPVN QLGLHHLQHL MFSMDDLKKN VAKYATQMFM DHTSIPPPIT  180
GLGPTGFGPP QIFADANSSA FSFRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-52M-type_MADS family protein