PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12795.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 622aa MW: 70420.8 Da PI: 8.7789

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45	2.4e-14	78	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd +l + + ++G g+W++++ + g+ R +k+c++rw +yl RDY12795.1 78 KGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYL 125 678*******************************************97 PP
2	Myb_DNA-binding	55.1	1.7e-17	131	176	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g++T++E+e ++ ++++lG++ W+ I+++++ gRt++++k++w++yl RDY12795.1 131 KGKFTKQEEETILALHHMLGNK-WSQISQHLP-GRTDNEIKNYWHSYL 176 79******************.*****.**********997 PP
3	Myb_DNA-binding	55.1	1.8e-17	335	381	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT++Ed+ lvd+++ +G g+W+t +++ g+ R++k+c++rw +yl RDY12795.1 335 GAWTPQEDQALVDYINNHGHGSWRTLPKHAGLLRCGKSCRLRWINYL 381 89***************************99**********97 PP
4	Myb_DNA-binding	53.3	6.3e-17	387	432	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+ +v+++ +lG++ W++Ia+ ++ gRt++++k++w+++l RDY12795.1 387 RGPFTKEEESTIVQLHGMLGNR-WAAIASQLP-GRTDNEIKNYWNTHL 432 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MALVRTIFSY SNISMHKLVD SSRLPDSLLL AFISSTAYIS QRKKTKAENP IEFPAYNCVR 60 QSKMGCQALE KAKAKHKKGL WSPEEDNKLR NHILKHGHGC WSSVPIKAGL QRNGKSCRLR 120 WINYLRPGLK KGKFTKQEEE TILALHHMLG NKWSQISQHL PGRTDNEIKN YWHSYLKKRV 180 AKAKEMESHN QIKHASSSSD TMDSSHSLQK LATQGPQNYN FTKEACQSSL PKLLFAEWLS 240 LDHVHGGNSA NSLDSLVLRN GFDQNSCFQE AAIHDMSEVP FGGEYHKCLT NVSTPEMFNS 300 QLRYANQMVE NGFIHCIPGV DLSSNFSMSN DAIMGAWTPQ EDQALVDYIN NHGHGSWRTL 360 PKHAGLLRCG KSCRLRWINY LRPGIKRGPF TKEEESTIVQ LHGMLGNRWA AIASQLPGRT 420 DNEIKNYWNT HLKKRLLRCH FLRAKQPCVI PDQIIVKSES PSTRHMVQWE SVRVEAEARL 480 SMESSFLNSW PTSKTCPDHF LQLWHSEVGH SFRMIKGKEA ILCRSPFSQP SSSSKLESCS 540 DVSLQVKNTG TSSCTPNHED VNMIHEQTSS YKPKLDDDTA GSESGNYEFL DASDSALKHL 600 LHMPDSDIGF LGQNDNFLNL LD

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MALVRTIFSY SNISMHKLVD SSRLPDSLLL AFISSTAYIS QRKKTKAENP IEFPAYNCVR  60
QSKMGCQALE KAKAKHKKGL WSPEEDNKLR NHILKHGHGC WSSVPIKAGL QRNGKSCRLR  120
WINYLRPGLK KGKFTKQEEE TILALHHMLG NKWSQISQHL PGRTDNEIKN YWHSYLKKRV  180
AKAKEMESHN QIKHASSSSD TMDSSHSLQK LATQGPQNYN FTKEACQSSL PKLLFAEWLS  240
LDHVHGGNSA NSLDSLVLRN GFDQNSCFQE AAIHDMSEVP FGGEYHKCLT NVSTPEMFNS  300
QLRYANQMVE NGFIHCIPGV DLSSNFSMSN DAIMGAWTPQ EDQALVDYIN NHGHGSWRTL  360
PKHAGLLRCG KSCRLRWINY LRPGIKRGPF TKEEESTIVQ LHGMLGNRWA AIASQLPGRT  420
DNEIKNYWNT HLKKRLLRCH FLRAKQPCVI PDQIIVKSES PSTRHMVQWE SVRVEAEARL  480
SMESSFLNSW PTSKTCPDHF LQLWHSEVGH SFRMIKGKEA ILCRSPFSQP SSSSKLESCS  540
DVSLQVKNTG TSSCTPNHED VNMIHEQTSS YKPKLDDDTA GSESGNYEFL DASDSALKHL  600
LHMPDSDIGF LGQNDNFLNL LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	9e-77	MYB family protein