PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12841.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

NF-YA

Protein Properties

Length: 385aa MW: 42930.7 Da PI: 7.4996

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	102.5	4e-32	150	206	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF RDY12841.1 150 QEPVYVNAKQYQGILRRRQARAKAELEKKL-IKVRKPYLHESRHQHAMRRARGNGGRF 206 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MQPKSDTVNL PRSDPHSFTP NNVYSEPWWR GIQYNPVPQA MSGMNASNSS SLERPNGDSE 60 SSEDQSLSSN GLNEEDDDAT KEPQPTAPNQ PGNYGQDHQA MQHSSLSAPS VHDDCHTQAP 120 QLELVGHSIG YAPFIGMPHA RMALPLEMAQ EPVYVNAKQY QGILRRRQAR AKAELEKKLI 180 KVRKPYLHES RHQHAMRRAR GNGGRFAKKT EVEASNQMNK EKDMGTGPVP LSQSLSLCGF 240 EPLPSDSAGT WNSPSVQQDA RGSQVHERFE EHNYANGRGP YHNHNVLQSS STFVLHSGER 300 VEEGDCSGQQ RGSISSEHTS QRRLAIQRQI ILGCVSSVHD MGRRMIDWAM ILVLLKSTNP 360 SLYSLSFFFS FCTKVVVREV KDQKS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MQPKSDTVNL PRSDPHSFTP NNVYSEPWWR GIQYNPVPQA MSGMNASNSS SLERPNGDSE  60
SSEDQSLSSN GLNEEDDDAT KEPQPTAPNQ PGNYGQDHQA MQHSSLSAPS VHDDCHTQAP  120
QLELVGHSIG YAPFIGMPHA RMALPLEMAQ EPVYVNAKQY QGILRRRQAR AKAELEKKLI  180
KVRKPYLHES RHQHAMRRAR GNGGRFAKKT EVEASNQMNK EKDMGTGPVP LSQSLSLCGF  240
EPLPSDSAGT WNSPSVQQDA RGSQVHERFE EHNYANGRGP YHNHNVLQSS STFVLHSGER  300
VEEGDCSGQQ RGSISSEHTS QRRLAIQRQI ILGCVSSVHD MGRRMIDWAM ILVLLKSTNP  360
SLYSLSFFFS FCTKVVVREV KDQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20910.1	1e-56	NF-YA family protein