PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY12941.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 365aa MW: 39809.2 Da PI: 8.9472

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY12941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.3	3.3e-41	72	148	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCevhsk+++v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ RDY12941.1 72 CLVDGCHSDLSNCRDYHRRHKVCEVHSKTAQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 148 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
METMEGSSRY GMYRAKGEFS VDLKLGQVGN SATESMLNKS KDAVGVSKMT SSSSGSSKRA 60 RALSNGTQTV SCLVDGCHSD LSNCRDYHRR HKVCEVHSKT AQVTIGGQKQ RFCQQCSRFH 120 SLEEFDEGKR SCRKRLDGHN RRRRKPQPEP LTRSGGFLSN YQGSQLLPFS SSHVYPSTTV 180 VSPGWGGVIS SGDIRLHGHN HNHNHQQVHL VDKQDLFLGS SPSGYKEGKQ LAFMQGEHTL 240 NNQSPHLAGG SVGQAQVFLR SSPYSESGGM RCKMFCDSIT SSVHDSSRAL SLLSSPQPHS 300 PGNGLNQMVN PHSPLMQPLG LSLHDNSLDP VLGPHGSDHS SSMYNMGSNG SQGNEAPPLF 360 PFQWE

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

METMEGSSRY GMYRAKGEFS VDLKLGQVGN SATESMLNKS KDAVGVSKMT SSSSGSSKRA  60
RALSNGTQTV SCLVDGCHSD LSNCRDYHRR HKVCEVHSKT AQVTIGGQKQ RFCQQCSRFH  120
SLEEFDEGKR SCRKRLDGHN RRRRKPQPEP LTRSGGFLSN YQGSQLLPFS SSHVYPSTTV  180
VSPGWGGVIS SGDIRLHGHN HNHNHQQVHL VDKQDLFLGS SPSGYKEGKQ LAFMQGEHTL  240
NNQSPHLAGG SVGQAQVFLR SSPYSESGGM RCKMFCDSIT SSVHDSSRAL SLLSSPQPHS  300
PGNGLNQMVN PHSPLMQPLG LSLHDNSLDP VLGPHGSDHS SSMYNMGSNG SQGNEAPPLF  360
PFQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	146	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-66	SBP family protein