![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RDY13021.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
| Family | NAC | ||||||||
| Protein Properties | Length: 190aa MW: 21981.6 Da PI: 4.7959 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 110.1 | 2.6e-34 | 8 | 127 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98
lppGfrF Ptdeelvv++L++k++ +++ +vi+++++y ++Pw+L+ ++ ae k+wy++s+r +nr+t++gyW g +++v+++ +++
RDY13021.1 8 LPPGFRFYPTDEELVVHFLQRKANLLPCHP-DVIPDLELYPYDPWELHGRALAEGKQWYYYSRRT--------QNRVTANGYWMPMGMEEAVVTSsSNK 97
79*************************999.99**************97777889*******984........58**************9999886778 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
vg+kk vf+ g+ap+ + t+W+m+ey l
RDY13021.1 98 RVGMKKYYVFHVGEAPNVNITNWIMQEYLL 127
8***************************75 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 190 aa Download sequence |
MGDNNVNLPP GFRFYPTDEE LVVHFLQRKA NLLPCHPDVI PDLELYPYDP WELHGRALAE 60 GKQWYYYSRR TQNRVTANGY WMPMGMEEAV VTSSSNKRVG MKKYYVFHVG EAPNVNITNW 120 IMQEYLLLDS ASSSRSSRRR AQPKPDHSKW VICRVYERDS DEDGGDGTEL SCLDEVFLSL 180 DDLDEISLPN |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G64530.1 | 3e-86 | NAC family protein | ||||




