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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY13080.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | WRKY | ||||||||
| Protein Properties | Length: 140aa MW: 15912.3 Da PI: 4.6694 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 76 | 4.6e-24 | 94 | 139 | 1 | 46 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk 46
ldDg++WrKYG+K+vk+s++pr+YY+C+ gC vkk+ver+++dp+
RDY13080.1 94 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVDGCAVKKRVERDKDDPS 139
59****************************************9986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 140 aa Download sequence |
MTDKNPKPQD SPDSGFINEL SEYLNFDGDQ WPDDDPDSFV PEHVLTQDNQ ANEFGASSGS 60 HFEGASSRDV GNEREKKEVI DRVAFKTKSE VEILDDGFKW RKYGKKMVKN SPNPRNYYKC 120 SVDGCAVKKR VERDKDDPSS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G26170.1 | 1e-36 | WRKY family protein | ||||




