PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13788.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 491aa MW: 55968.6 Da PI: 6.9443

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.6	1.9e-24	166	260	1	84
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdq 84 +Wt+++v++Li+a+++++e+ + +kk++W++vs++m+erg ++sp+qC++k+++lnkrykk++++ +++ +++++++ ++++ RDY13788.1 166 KWTDKMVRLLITAVSYIGEDATPDGgggrrkfnvlQKKGKWKSVSRVMAERGNHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLEM 260 7************99999997544566778888********************************************55888887777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MRAYIAWSHR SANTSKQPLS LVLLSFFLLF PLVLLRALRH VFTPLMEGNL SQGGMVQGGG 60 SFGGFDLPGS MRVQRQGQHP HSMNQHHQTH PCQGSSVHAS VHDGFPLSMG TLQNCDQTMS 120 MTEFSQGDRN KNSPSDEDEP SFAEEGVDGH HEAGRGKKGL PWQRVKWTDK MVRLLITAVS 180 YIGEDATPDG GGGRRKFNVL QKKGKWKSVS RVMAERGNHV SPQQCEDKFN DLNKRYKKLN 240 DMLGRGTSCQ VVENPALLEM INYLSEKEKD DVRKILSSKH LFYEEMCSYH NGNRLHLPHD 300 PALQRSLQLA LRNREDHDND DIRKSYHDDH DEDDLDAETD DHDDFEENHA SHADSRGVYG 360 SSGGSMKRLR LGHGQEDAAT FGSALNSQEF NKSSYPQMVQ SDVNQALPEG TRAAWLQKQW 420 VESRSLQLEE QKLQIQVEML ELEKQRFKWD KFSKKKDREL EKLKLENEKM KLENERIALE 480 LKRKEMGAGF N

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MRAYIAWSHR SANTSKQPLS LVLLSFFLLF PLVLLRALRH VFTPLMEGNL SQGGMVQGGG  60
SFGGFDLPGS MRVQRQGQHP HSMNQHHQTH PCQGSSVHAS VHDGFPLSMG TLQNCDQTMS  120
MTEFSQGDRN KNSPSDEDEP SFAEEGVDGH HEAGRGKKGL PWQRVKWTDK MVRLLITAVS  180
YIGEDATPDG GGGRRKFNVL QKKGKWKSVS RVMAERGNHV SPQQCEDKFN DLNKRYKKLN  240
DMLGRGTSCQ VVENPALLEM INYLSEKEKD DVRKILSSKH LFYEEMCSYH NGNRLHLPHD  300
PALQRSLQLA LRNREDHDND DIRKSYHDDH DEDDLDAETD DHDDFEENHA SHADSRGVYG  360
SSGGSMKRLR LGHGQEDAAT FGSALNSQEF NKSSYPQMVQ SDVNQALPEG TRAAWLQKQW  420
VESRSLQLEE QKLQIQVEML ELEKQRFKWD KFSKKKDREL EKLKLENEKM KLENERIALE  480
LKRKEMGAGF N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-158	Trihelix family protein