PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13791.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 637aa MW: 70591.8 Da PI: 5.9665

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	97	1.6e-30	67	150	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+km+e g++rs+k+Ckek+en+ k++k++keg++++ ++ +t+++fdql+ RDY13791.1 67 RWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGK--QDGKTYRFFDQLQ 150 8******************************************************************95..67778****98 PP
2	trihelix	105.3	4.3e-33	464	549	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ +++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a RDY13791.1 464 RWPKVEVQALIKLRTNLDAKYQENGPKGPLWEEISASMRKIGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 549 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MLGDSAVLGA GGGGGGEDGA SADAVAALPA GAHDGAVAAT AGGLGSNSGD DERGRIEEGE 60 RSFGGNRWPR QETLALLRIR SDMDVAFRDA SVKGPLWEEV SRKMAELGYH RSSKKCKEKF 120 ENVYKYHKRT KEGRSGKQDG KTYRFFDQLQ ALENHTPTPH SPNPSPKPLQ SAPSRVAATT 180 TASVSLPITT TTTVSLPIPI PETVAMQQVL SNTTLTSTVP HITVPSTTTL PITIPQPILT 240 TPSINLTIPS YPPTNPTNFP PPSTANPTPP PSFPTDTLSN SSSSSTSSDE TLEGRRKRKR 300 KWKDFFERLM KEVIEKQEEL QKKFLEAIEK REHDRIAREE AWRVQEMKRI NREREILSQE 360 RSIAAAKDAA VMSFLQKIAE QQNLGQALSN INLVQPPQPP PPQLSAAPPP VQQPPLTAVV 420 TQPVVVPQPQ QQVMMNTEIV KVDNNNNNNN NNNGENFMAS SSSRWPKVEV QALIKLRTNL 480 DAKYQENGPK GPLWEEISAS MRKIGYNRNA KRCKEKWENI NKYFKKVKES NKKRPEDSKT 540 CPYFHQLDAL YRQKHKADSS VVKPESTVAP LMVRPEQQWP PQQDRDITME DVENEDDEYE 600 EREGEDEEDD EEDEEGSGGG GGNYEIVANK TSTASAE

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MLGDSAVLGA GGGGGGEDGA SADAVAALPA GAHDGAVAAT AGGLGSNSGD DERGRIEEGE  60
RSFGGNRWPR QETLALLRIR SDMDVAFRDA SVKGPLWEEV SRKMAELGYH RSSKKCKEKF  120
ENVYKYHKRT KEGRSGKQDG KTYRFFDQLQ ALENHTPTPH SPNPSPKPLQ SAPSRVAATT  180
TASVSLPITT TTTVSLPIPI PETVAMQQVL SNTTLTSTVP HITVPSTTTL PITIPQPILT  240
TPSINLTIPS YPPTNPTNFP PPSTANPTPP PSFPTDTLSN SSSSSTSSDE TLEGRRKRKR  300
KWKDFFERLM KEVIEKQEEL QKKFLEAIEK REHDRIAREE AWRVQEMKRI NREREILSQE  360
RSIAAAKDAA VMSFLQKIAE QQNLGQALSN INLVQPPQPP PPQLSAAPPP VQQPPLTAVV  420
TQPVVVPQPQ QQVMMNTEIV KVDNNNNNNN NNNGENFMAS SSSRWPKVEV QALIKLRTNL  480
DAKYQENGPK GPLWEEISAS MRKIGYNRNA KRCKEKWENI NKYFKKVKES NKKRPEDSKT  540
CPYFHQLDAL YRQKHKADSS VVKPESTVAP LMVRPEQQWP PQQDRDITME DVENEDDEYE  600
EREGEDEEDD EEDEEGSGGG GGNYEIVANK TSTASAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	300	RRKRKR
2	295	301	RRKRKRK
3	296	301	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-62	Trihelix family protein