PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY13813.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 250aa MW: 26749.6 Da PI: 7.4669

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY13813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.6	1e-38	54	155	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC +C++ap+f +q ++kfa+vhk+FGasnv+kll+++p ++r++a++++ yeA+ar++dPvyG+v++il+lqqq+++l+aela+l+ RDY13813.1 54 PCGACKFLRRKCIGGCIFAPHFGTDQgAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILALQQQVASLQAELAMLQ 152 7*********************9989*******************************************************************99 PP DUF260 99 eel 101 ++l RDY13813.1 153 SQL 155 885 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MPDPQSGNGN GDGSGGDGNN NTSGSRRRST ASRRVMIAPS SSQEAMVGSS PTTPCGACKF 60 LRRKCIGGCI FAPHFGTDQG AAKFAAVHKV FGASNVSKLL SNIPANRRHE AATTISYEAQ 120 ARLSDPVYGC VSTILALQQQ VASLQAELAM LQSQLMNSRF AYASALHSTQ QLQQPNMNAA 180 ALQPAYSNNS CASTNLMNLG SFNNNPGFDL AMDTTPSSHT LEPLQLSRLS QYEEEDEEES 240 RTQQAFNHRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	9e-59	LBD family protein