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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY14170.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 135aa MW: 15275 Da PI: 6.5578 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 62.4 | 9.6e-20 | 19 | 72 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g++ AeIrdp++ + + +lg+f+taeeAa+a+++a+ +l+g+
RDY14170.1 19 KYRGVRRRP-WGKYGAEIRDPKKSTSSSKQWLGTFDTAEEAARAYDRAAIALRGA 72
8********.**********9773335777**********************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 135 aa Download sequence |
MEEARREEQE KEKGGENVKY RGVRRRPWGK YGAEIRDPKK STSSSKQWLG TFDTAEEAAR 60 AYDRAAIALR GAFAILNFPD EYHSHLPFLS SSSSASTTVL GSSSAAQGDV IEFEYLDDKV 120 LEDLLELEEK RKKKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G23230.1 | 1e-18 | ERF family protein | ||||




