PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY14810.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 238aa MW: 24868.1 Da PI: 8.0215

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY14810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.2	1.8e-40	24	124	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++C++apyf +eq + +fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l+ RDY14810.1 24 PCGACKFLRRKCVPGCIFAPYFDSEQgATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQ 122 7*********************9989******************************************************************998 PP DUF260 99 ee 100 + RDY14810.1 123 GH 124 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MSINSSCSIS GGNNNSGGNN GGSPCGACKF LRRKCVPGCI FAPYFDSEQG ATHFAAVHKV 60 FGASNVSKLL LNIPVHKRLD AVVTICYEAQ ARLRDPVYGC VAHIFALQQQ VVSLQAELSY 120 LQGHLATLEL PQPPPPPSSP QATMAPPVIS IADLPSSAST GPVTYDLSSL FDPMAQTPSW 180 AVQPRSIDSR QYVGSSGTSP TSASGGDLQA LARELLHRHG SASVVACSNP SSSHSHAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	1e-79	LBD family protein